Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt88Q9CPR6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt88Q9CPR6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.27□□□□□ -0.12
Krt88Q9CPR6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt88Q9CPR6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.27□□□□□ -0.12
Krt88Q9CPR6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt88Q9CPR6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Krt88Q9CPR6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Krt88Q9CPR6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt88Q9CPR6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt88Q9CPR6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Krt88Q9CPR6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Krt88Q9CPR6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.27□□□□□ -0.12
Krt88Q9CPR6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Mir1199-201ENSMUST00000117015 119 ntBASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.27□□□□□ -0.13
Krt88Q9CPR6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Gm29707-201ENSMUST00000196325 491 ntBASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Odf3b-204ENSMUST00000227834 930 ntBASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt88Q9CPR6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Gm27463-201ENSMUST00000183569 57 ntBASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt88Q9CPR6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms