Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Trim11Q99PQ2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim11Q99PQ2 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.99■□□□□ 0.47
Trim11Q99PQ2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim11Q99PQ2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim11Q99PQ2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim11Q99PQ2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim11Q99PQ2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim11Q99PQ2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim11Q99PQ2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim11Q99PQ2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Trim11Q99PQ2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim11Q99PQ2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.98■□□□□ 0.47
Trim11Q99PQ2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.98■□□□□ 0.47
Trim11Q99PQ2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim11Q99PQ2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim11Q99PQ2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim11Q99PQ2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Trim11Q99PQ2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim11Q99PQ2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
Trim11Q99PQ2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Gm25406-201ENSMUST00000157599 105 ntBASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim11Q99PQ2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms