Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Rprl3-201ENSMUST00000157400 290 ntBASIC15.66■□□□□ 0.1
Trim33Q99PP7 Gm10819-201ENSMUST00000099988 561 ntBASIC15.66■□□□□ 0.1
Trim33Q99PP7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim33Q99PP7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.65■□□□□ 0.1
Trim33Q99PP7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.65■□□□□ 0.1
Trim33Q99PP7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim33Q99PP7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Gm13323-201ENSMUST00000120245 1151 ntBASIC15.64■□□□□ 0.09
Trim33Q99PP7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.64■□□□□ 0.09
Trim33Q99PP7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.64■□□□□ 0.09
Trim33Q99PP7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim33Q99PP7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Gm9103-201ENSMUST00000119371 405 ntBASIC15.63■□□□□ 0.09
Trim33Q99PP7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.63■□□□□ 0.09
Trim33Q99PP7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms