Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Gm11452-201ENSMUST00000122376 690 ntBASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tpgs1Q99MS8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Gm18195-201ENSMUST00000207604 706 ntBASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tpgs1Q99MS8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.39■□□□□ 0.22
Tpgs1Q99MS8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Tpgs1Q99MS8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 Gm7222-201ENSMUST00000117512 906 ntBASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 Gm10060-201ENSMUST00000212002 111 ntBASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tpgs1Q99MS8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms