Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.4□□□□□ -0.11
Lims1Q99JW4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lims1Q99JW4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.39□□□□□ -0.11
Lims1Q99JW4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lims1Q99JW4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.38□□□□□ -0.11
Lims1Q99JW4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lims1Q99JW4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Mir770-201ENSMUST00000103252 94 ntBASIC14.37□□□□□ -0.11
Lims1Q99JW4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lims1Q99JW4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Gm7367-201ENSMUST00000057611 492 ntBASIC14.36□□□□□ -0.11
Lims1Q99JW4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lims1Q99JW4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms