Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd1Q99J36 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd1Q99J36 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd1Q99J36 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Thumpd1Q99J36 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd1Q99J36 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd1Q99J36 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Thumpd1Q99J36 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Gm2274-201ENSMUST00000184539 609 ntBASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Thumpd1Q99J36 BC037039-201ENSMUST00000192003 2205 ntBASIC14.09□□□□□ -0.15
Thumpd1Q99J36 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.08□□□□□ -0.15
Thumpd1Q99J36 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.08□□□□□ -0.15
Thumpd1Q99J36 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Thumpd1Q99J36 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Thumpd1Q99J36 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Thumpd1Q99J36 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Thumpd1Q99J36 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms