Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Ank2-226ENSMUST00000189368 339 ntBASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb6Q91XZ4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Gm18669-201ENSMUST00000216049 778 ntBASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb6Q91XZ4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb6Q91XZ4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Gm12497-201ENSMUST00000138778 237 ntBASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Gm7506-201ENSMUST00000207758 815 ntBASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb6Q91XZ4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms