Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.1□□□□□ -0.15
Pcdhga3Q91XY5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga3Q91XY5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdhga3Q91XY5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdhga3Q91XY5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Gm29518-201ENSMUST00000190858 372 ntBASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Gm17808-201ENSMUST00000200859 894 ntBASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.09□□□□□ -0.15
Pcdhga3Q91XY5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga3Q91XY5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga3Q91XY5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdhga3Q91XY5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga3Q91XY5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga3Q91XY5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga3Q91XY5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga3Q91XY5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga3Q91XY5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga3Q91XY5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdhga3Q91XY5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdhga3Q91XY5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms