Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Gm2651-201ENSMUST00000203560 838 ntBASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Gm7506-201ENSMUST00000207758 815 ntBASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx41Q91VN6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx41Q91VN6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ddx41Q91VN6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ddx41Q91VN6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms