Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Gm43244-201ENSMUST00000196994 1285 ntBASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 AC172027.1-201ENSMUST00000217659 337 ntBASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb17Q91VD8 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Gm4459-201ENSMUST00000118750 468 ntBASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Gm44270-201ENSMUST00000203084 1234 ntBASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Gm44772-201ENSMUST00000207623 1191 ntBASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 AC165260.5-201ENSMUST00000224640 1247 ntBASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 CT025642.1-201ENSMUST00000224734 1219 ntBASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb17Q91VD8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Gm29288-201ENSMUST00000191582 901 ntBASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Gm43347-201ENSMUST00000200226 580 ntBASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb17Q91VD8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhb17Q91VD8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhb17Q91VD8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhb17Q91VD8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms