Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.92□□□□□ -0.34
Rab40cQ8VHQ4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.91□□□□□ -0.34
Rab40cQ8VHQ4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 BC037039-201ENSMUST00000192003 2205 ntBASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Gm11539-201ENSMUST00000119837 557 ntBASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Gm29707-201ENSMUST00000196325 491 ntBASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rab40cQ8VHQ4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.9□□□□□ -0.35
Rab40cQ8VHQ4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rab40cQ8VHQ4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rab40cQ8VHQ4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.9□□□□□ -0.35
Rab40cQ8VHQ4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms