Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rpa1Q8VEE4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rpa1Q8VEE4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Gm10812-201ENSMUST00000099864 546 ntBASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rpa1Q8VEE4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Gm18421-201ENSMUST00000204122 625 ntBASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms