Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.3■□□□□ 0.36
Rpap2Q8VC34 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpap2Q8VC34 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Gm34391-201ENSMUST00000203706 907 ntBASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpap2Q8VC34 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Rpap2Q8VC34 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpap2Q8VC34 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpap2Q8VC34 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpap2Q8VC34 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpap2Q8VC34 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpap2Q8VC34 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpap2Q8VC34 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpap2Q8VC34 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpap2Q8VC34 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Rpap2Q8VC34 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms