Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Vps39Q8R5L3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps39Q8R5L3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps39Q8R5L3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps39Q8R5L3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps39Q8R5L3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Vps39Q8R5L3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Vps39Q8R5L3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Vps39Q8R5L3 App-207ENSMUST00000227737 2827 ntBASIC15.83■□□□□ 0.13
Vps39Q8R5L3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Vps39Q8R5L3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Gm45328-201ENSMUST00000210942 917 ntBASIC15.83■□□□□ 0.12
Vps39Q8R5L3 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Vps39Q8R5L3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Gm11950-201ENSMUST00000121615 838 ntBASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Vps39Q8R5L3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps39Q8R5L3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Vps39Q8R5L3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.81■□□□□ 0.12
Vps39Q8R5L3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps39Q8R5L3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.81■□□□□ 0.12
Vps39Q8R5L3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps39Q8R5L3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Vps39Q8R5L3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps39Q8R5L3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps39Q8R5L3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps39Q8R5L3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps39Q8R5L3 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.81■□□□□ 0.12
Vps39Q8R5L3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps39Q8R5L3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Vps39Q8R5L3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Sybu-209ENSMUST00000228639 4113 ntBASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Vps39Q8R5L3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms