Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Birc2-201ENSMUST00000054878 378 ntBASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gtf3c5Q8R2T8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gtf3c5Q8R2T8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.52■□□□□ 0.55
Gtf3c5Q8R2T8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gtf3c5Q8R2T8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Gtf3c5Q8R2T8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gtf3c5Q8R2T8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.52■□□□□ 0.55
Gtf3c5Q8R2T8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gtf3c5Q8R2T8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gtf3c5Q8R2T8 Gm43399-201ENSMUST00000202546 2374 ntBASIC18.52■□□□□ 0.55
Gtf3c5Q8R2T8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Gtf3c5Q8R2T8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gtf3c5Q8R2T8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Gm12497-201ENSMUST00000138778 237 ntBASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Gm43061-201ENSMUST00000198850 2241 ntBASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Gm44291-201ENSMUST00000203102 2865 ntBASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3c5Q8R2T8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms