Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm8825-201ENSMUST00000182565 998 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm4518-201ENSMUST00000182638 718 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atf7Q8R0S1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Gm25745-201ENSMUST00000174945 133 ntBASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atf7Q8R0S1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.61■□□□□ 0.57
Atf7Q8R0S1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf7Q8R0S1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Atf7Q8R0S1 Gm12895-201ENSMUST00000122214 226 ntBASIC18.61■□□□□ 0.57
Atf7Q8R0S1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.61■□□□□ 0.57
Atf7Q8R0S1 Gm17807-201ENSMUST00000186869 298 ntBASIC18.61■□□□□ 0.57
Atf7Q8R0S1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf7Q8R0S1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf7Q8R0S1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Atf7Q8R0S1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf7Q8R0S1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf7Q8R0S1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atf7Q8R0S1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Atf7Q8R0S1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.59■□□□□ 0.57
Atf7Q8R0S1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Atf7Q8R0S1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms