Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Gm21559-201ENSMUST00000220638 855 ntBASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Gm8587-201ENSMUST00000076538 843 ntBASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Mrpl47Q8K2Y7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Gm11355-201ENSMUST00000121120 306 ntBASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Mrpl47Q8K2Y7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mrpl47Q8K2Y7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mrpl47Q8K2Y7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mrpl47Q8K2Y7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mrpl47Q8K2Y7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mrpl47Q8K2Y7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mrpl47Q8K2Y7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mrpl47Q8K2Y7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mrpl47Q8K2Y7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mrpl47Q8K2Y7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Mrpl47Q8K2Y7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mrpl47Q8K2Y7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Mrpl47Q8K2Y7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Gm43799-201ENSMUST00000201845 579 ntBASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Mrpl47Q8K2Y7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Mrpl47Q8K2Y7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mrpl47Q8K2Y7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mrpl47Q8K2Y7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mrpl47Q8K2Y7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mrpl47Q8K2Y7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Mrpl47Q8K2Y7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mrpl47Q8K2Y7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mrpl47Q8K2Y7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mrpl47Q8K2Y7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mrpl47Q8K2Y7 Gm22697-201ENSMUST00000175194 63 ntBASIC15.64■□□□□ 0.09
Mrpl47Q8K2Y7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms