Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfwd3Q8CIK8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.85□□□□□ -0.03
Rfwd3Q8CIK8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfwd3Q8CIK8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Rfwd3Q8CIK8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfwd3Q8CIK8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfwd3Q8CIK8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfwd3Q8CIK8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Rfwd3Q8CIK8 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.83□□□□□ -0.03
Rfwd3Q8CIK8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms