Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Gm11950-201ENSMUST00000121615 838 ntBASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Pdlim5Q8CI51 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 BC037039-201ENSMUST00000192003 2205 ntBASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Pdlim5Q8CI51 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim5Q8CI51 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim5Q8CI51 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim5Q8CI51 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim5Q8CI51 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim5Q8CI51 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim5Q8CI51 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Pdlim5Q8CI51 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim5Q8CI51 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim5Q8CI51 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Pdlim5Q8CI51 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim5Q8CI51 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Gm6659-201ENSMUST00000174752 547 ntBASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.51□□□□□ -0.09
Pdlim5Q8CI51 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pdlim5Q8CI51 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim5Q8CI51 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim5Q8CI51 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms