Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Gm45167-201ENSMUST00000208007 322 ntBASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sh3rf2Q8BZT2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sh3rf2Q8BZT2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Sh3rf2Q8BZT2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sh3rf2Q8BZT2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.96■□□□□ 0.14
Sh3rf2Q8BZT2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sh3rf2Q8BZT2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Sh3rf2Q8BZT2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sh3rf2Q8BZT2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sh3rf2Q8BZT2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sh3rf2Q8BZT2 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sh3rf2Q8BZT2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sh3rf2Q8BZT2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms