Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trerf1Q8BXJ2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trerf1Q8BXJ2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trerf1Q8BXJ2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trerf1Q8BXJ2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Gm27742-201ENSMUST00000184667 60 ntBASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trerf1Q8BXJ2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Gm9103-201ENSMUST00000119371 405 ntBASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trerf1Q8BXJ2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms