Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Cdk5rap1Q8BTW8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cdk5rap1Q8BTW8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cdk5rap1Q8BTW8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Cdk5rap1Q8BTW8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm13036-201ENSMUST00000117799 748 ntBASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm5364-201ENSMUST00000216789 889 ntBASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cdk5rap1Q8BTW8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Psmb5-202ENSMUST00000227257 622 ntBASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Dancr-204ENSMUST00000132389 2347 ntBASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdk5rap1Q8BTW8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm11764-201ENSMUST00000120221 623 ntBASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm27525-201ENSMUST00000184465 107 ntBASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Gm19164-201ENSMUST00000210667 640 ntBASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdk5rap1Q8BTW8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cdk5rap1Q8BTW8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms