Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Gm45328-201ENSMUST00000210942 917 ntBASIC16.24■□□□□ 0.19
Suds3Q8BR65 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Suds3Q8BR65 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Gm27742-201ENSMUST00000184667 60 ntBASIC16.23■□□□□ 0.19
Suds3Q8BR65 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.23■□□□□ 0.19
Suds3Q8BR65 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Suds3Q8BR65 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.22■□□□□ 0.19
Suds3Q8BR65 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Suds3Q8BR65 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.21■□□□□ 0.19
Suds3Q8BR65 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.21■□□□□ 0.19
Suds3Q8BR65 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Olfr129-201ENSMUST00000122318 993 ntBASIC16.21■□□□□ 0.19
Suds3Q8BR65 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Gm36967-201ENSMUST00000193814 266 ntBASIC16.21■□□□□ 0.19
Suds3Q8BR65 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Suds3Q8BR65 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Suds3Q8BR65 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Suds3Q8BR65 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Suds3Q8BR65 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Suds3Q8BR65 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Suds3Q8BR65 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Suds3Q8BR65 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Suds3Q8BR65 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.21■□□□□ 0.18
Suds3Q8BR65 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Suds3Q8BR65 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms