Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cpsf4Q8BQZ5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cpsf4Q8BQZ5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Cpsf4Q8BQZ5 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cpsf4Q8BQZ5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.33■□□□□ 0.05
Cpsf4Q8BQZ5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.33■□□□□ 0.05
Cpsf4Q8BQZ5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cpsf4Q8BQZ5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cpsf4Q8BQZ5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Gm36967-201ENSMUST00000193814 266 ntBASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Gm18669-201ENSMUST00000216049 778 ntBASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cpsf4Q8BQZ5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cpsf4Q8BQZ5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.31■□□□□ 0.04
Cpsf4Q8BQZ5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms