Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Gm29707-201ENSMUST00000196325 491 ntBASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Gm18421-201ENSMUST00000204122 625 ntBASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Gm18032-201ENSMUST00000222541 538 ntBASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.97□□□□□ -0.01
Ckap4Q8BMK4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Gm13836-201ENSMUST00000121159 501 ntBASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Gm10231-201ENSMUST00000181584 441 ntBASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Gm10175-202ENSMUST00000208752 441 ntBASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Ckap4Q8BMK4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.96□□□□□ -0.02
Ckap4Q8BMK4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ckap4Q8BMK4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ckap4Q8BMK4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ckap4Q8BMK4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ckap4Q8BMK4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.96□□□□□ -0.02
Ckap4Q8BMK4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms