Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Gm25990-201ENSMUST00000102440 86 ntBASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Gm13418-201ENSMUST00000119097 944 ntBASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.22■□□□□ 0.03
Trim23Q8BGX0 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trim23Q8BGX0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.21■□□□□ 0.03
Trim23Q8BGX0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim23Q8BGX0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim23Q8BGX0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim23Q8BGX0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim23Q8BGX0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Gm6089-201ENSMUST00000197666 938 ntBASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Gm7461-201ENSMUST00000058918 827 ntBASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim23Q8BGX0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms