Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp6nlQ80XC3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Usp6nlQ80XC3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp6nlQ80XC3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp6nlQ80XC3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp6nlQ80XC3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Gm27494-201ENSMUST00000184735 189 ntBASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Gm45747-201ENSMUST00000212203 999 ntBASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.34■□□□□ 0.37
Usp6nlQ80XC3 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms