Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rfx4Q7TNK1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rfx4Q7TNK1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rfx4Q7TNK1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms