Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ubfd1Q78JW9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.35■□□□□ 0.05
Ubfd1Q78JW9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Gm5682-201ENSMUST00000173402 505 ntBASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Gm8000-201ENSMUST00000188378 592 ntBASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Gm37153-201ENSMUST00000193637 231 ntBASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ubfd1Q78JW9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ubfd1Q78JW9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ubfd1Q78JW9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ubfd1Q78JW9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ubfd1Q78JW9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ubfd1Q78JW9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.33■□□□□ 0.05
Ubfd1Q78JW9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ubfd1Q78JW9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ubfd1Q78JW9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ubfd1Q78JW9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ubfd1Q78JW9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ubfd1Q78JW9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.31■□□□□ 0.04
Ubfd1Q78JW9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ubfd1Q78JW9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ubfd1Q78JW9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ubfd1Q78JW9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ubfd1Q78JW9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.31■□□□□ 0.04
Ubfd1Q78JW9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ubfd1Q78JW9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms