Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Gm2756-201ENSMUST00000195851 400 ntBASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.89■□□□□ 0.61
Npc1l1Q6T3U4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npc1l1Q6T3U4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 Gm24513-201ENSMUST00000174964 138 ntBASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 Gm27397-201ENSMUST00000184997 107 ntBASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npc1l1Q6T3U4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npc1l1Q6T3U4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npc1l1Q6T3U4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1l1Q6T3U4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1l1Q6T3U4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1l1Q6T3U4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npc1l1Q6T3U4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms