Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac4Q6NZM9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hdac4Q6NZM9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Hdac4Q6NZM9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.66■□□□□ 0.42
Hdac4Q6NZM9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hdac4Q6NZM9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hdac4Q6NZM9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hdac4Q6NZM9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hdac4Q6NZM9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hdac4Q6NZM9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 Asic1-205ENSMUST00000228185 1818 ntBASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 Gm12895-201ENSMUST00000122214 226 ntBASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hdac4Q6NZM9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Gm17807-201ENSMUST00000186869 298 ntBASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Gm7367-201ENSMUST00000057611 492 ntBASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hdac4Q6NZM9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hdac4Q6NZM9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hdac4Q6NZM9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms