Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.93□□□□□ -0.34
Col7a1Q63870 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col7a1Q63870 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col7a1Q63870 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.93□□□□□ -0.34
Col7a1Q63870 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col7a1Q63870 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col7a1Q63870 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.93□□□□□ -0.34
Col7a1Q63870 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.93□□□□□ -0.34
Col7a1Q63870 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.93□□□□□ -0.34
Col7a1Q63870 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.93□□□□□ -0.34
Col7a1Q63870 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col7a1Q63870 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col7a1Q63870 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col7a1Q63870 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.93□□□□□ -0.34
Col7a1Q63870 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col7a1Q63870 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col7a1Q63870 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Col7a1Q63870 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.92□□□□□ -0.34
Col7a1Q63870 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.92□□□□□ -0.34
Col7a1Q63870 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.92□□□□□ -0.34
Col7a1Q63870 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.92□□□□□ -0.34
Col7a1Q63870 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col7a1Q63870 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col7a1Q63870 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.91□□□□□ -0.34
Col7a1Q63870 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col7a1Q63870 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Col7a1Q63870 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Gm5566-201ENSMUST00000116118 459 ntBASIC12.91□□□□□ -0.34
Col7a1Q63870 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.91□□□□□ -0.34
Col7a1Q63870 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.91□□□□□ -0.34
Col7a1Q63870 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.91□□□□□ -0.34
Col7a1Q63870 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.91□□□□□ -0.34
Col7a1Q63870 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col7a1Q63870 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.91□□□□□ -0.34
Col7a1Q63870 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.91□□□□□ -0.34
Col7a1Q63870 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.91□□□□□ -0.34
Col7a1Q63870 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.91□□□□□ -0.34
Col7a1Q63870 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.91□□□□□ -0.34
Col7a1Q63870 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Col7a1Q63870 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.91□□□□□ -0.34
Col7a1Q63870 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col7a1Q63870 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.9□□□□□ -0.34
Col7a1Q63870 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Col7a1Q63870 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.9□□□□□ -0.34
Col7a1Q63870 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.9□□□□□ -0.34
Col7a1Q63870 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.9□□□□□ -0.34
Col7a1Q63870 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col7a1Q63870 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Col7a1Q63870 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.9□□□□□ -0.34
Col7a1Q63870 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col7a1Q63870 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col7a1Q63870 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col7a1Q63870 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms