Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.8□□□□□ -0.04
AtmQ62388 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AtmQ62388 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
AtmQ62388 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AtmQ62388 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AtmQ62388 Haglr-201ENSMUST00000100000 2085 ntBASIC14.8□□□□□ -0.04
AtmQ62388 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AtmQ62388 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AtmQ62388 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AtmQ62388 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.8□□□□□ -0.04
AtmQ62388 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.8□□□□□ -0.04
AtmQ62388 Mir8102-201ENSMUST00000184148 139 ntBASIC14.8□□□□□ -0.04
AtmQ62388 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AtmQ62388 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AtmQ62388 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AtmQ62388 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AtmQ62388 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AtmQ62388 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
AtmQ62388 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
AtmQ62388 Gm15693-201ENSMUST00000120470 637 ntBASIC14.79□□□□□ -0.04
AtmQ62388 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.79□□□□□ -0.04
AtmQ62388 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AtmQ62388 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
AtmQ62388 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AtmQ62388 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
AtmQ62388 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AtmQ62388 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.79□□□□□ -0.04
AtmQ62388 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.79□□□□□ -0.04
AtmQ62388 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.79□□□□□ -0.04
AtmQ62388 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AtmQ62388 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.79□□□□□ -0.04
AtmQ62388 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.79□□□□□ -0.04
AtmQ62388 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
AtmQ62388 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AtmQ62388 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AtmQ62388 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
AtmQ62388 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AtmQ62388 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.79□□□□□ -0.04
AtmQ62388 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.79□□□□□ -0.04
AtmQ62388 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.79□□□□□ -0.04
AtmQ62388 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AtmQ62388 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.79□□□□□ -0.04
AtmQ62388 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.79□□□□□ -0.04
AtmQ62388 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.79□□□□□ -0.04
AtmQ62388 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AtmQ62388 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
AtmQ62388 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.78□□□□□ -0.04
AtmQ62388 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.78□□□□□ -0.04
AtmQ62388 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Gm16198-201ENSMUST00000118766 670 ntBASIC14.78□□□□□ -0.04
AtmQ62388 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.78□□□□□ -0.04
AtmQ62388 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.78□□□□□ -0.04
AtmQ62388 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
AtmQ62388 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.78□□□□□ -0.04
AtmQ62388 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
AtmQ62388 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
AtmQ62388 Gm7787-201ENSMUST00000216858 688 ntBASIC14.78□□□□□ -0.04
AtmQ62388 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
AtmQ62388 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.78□□□□□ -0.04
AtmQ62388 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AtmQ62388 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AtmQ62388 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AtmQ62388 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AtmQ62388 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AtmQ62388 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
AtmQ62388 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
AtmQ62388 Gm8602-201ENSMUST00000184045 607 ntBASIC14.77□□□□□ -0.04
AtmQ62388 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AtmQ62388 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.77□□□□□ -0.04
AtmQ62388 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
AtmQ62388 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.77□□□□□ -0.04
AtmQ62388 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AtmQ62388 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.77□□□□□ -0.04
AtmQ62388 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
AtmQ62388 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AtmQ62388 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AtmQ62388 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
AtmQ62388 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AtmQ62388 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
AtmQ62388 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AtmQ62388 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AtmQ62388 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AtmQ62388 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms