Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim27Q62158 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim27Q62158 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim27Q62158 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Trim27Q62158 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim27Q62158 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim27Q62158 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim27Q62158 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim27Q62158 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim27Q62158 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim27Q62158 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim27Q62158 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.36■□□□□ 0.69
Trim27Q62158 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim27Q62158 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim27Q62158 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Trim27Q62158 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim27Q62158 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Trim27Q62158 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim27Q62158 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim27Q62158 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.35■□□□□ 0.69
Trim27Q62158 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.35■□□□□ 0.69
Trim27Q62158 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim27Q62158 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim27Q62158 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim27Q62158 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim27Q62158 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim27Q62158 Asic1-205ENSMUST00000228185 1818 ntBASIC19.35■□□□□ 0.69
Trim27Q62158 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim27Q62158 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim27Q62158 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim27Q62158 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Trim27Q62158 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim27Q62158 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim27Q62158 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.34■□□□□ 0.69
Trim27Q62158 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Gm10819-201ENSMUST00000099988 561 ntBASIC19.34■□□□□ 0.69
Trim27Q62158 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim27Q62158 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim27Q62158 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim27Q62158 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms