Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.57■□□□□ 0.56
Ctr9Q62018 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.57■□□□□ 0.56
Ctr9Q62018 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ctr9Q62018 Gm6550-201ENSMUST00000187574 993 ntBASIC18.57■□□□□ 0.56
Ctr9Q62018 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ctr9Q62018 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ctr9Q62018 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ctr9Q62018 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ctr9Q62018 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.56■□□□□ 0.56
Ctr9Q62018 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
Ctr9Q62018 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.56■□□□□ 0.56
Ctr9Q62018 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
Ctr9Q62018 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Ctr9Q62018 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ctr9Q62018 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.56■□□□□ 0.56
Ctr9Q62018 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ctr9Q62018 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.56■□□□□ 0.56
Ctr9Q62018 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.56■□□□□ 0.56
Ctr9Q62018 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.56■□□□□ 0.56
Ctr9Q62018 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ctr9Q62018 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Ctr9Q62018 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.55■□□□□ 0.56
Ctr9Q62018 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ctr9Q62018 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.55■□□□□ 0.56
Ctr9Q62018 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ctr9Q62018 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.54■□□□□ 0.56
Ctr9Q62018 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.54■□□□□ 0.56
Ctr9Q62018 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.54■□□□□ 0.56
Ctr9Q62018 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.54■□□□□ 0.56
Ctr9Q62018 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.54■□□□□ 0.56
Ctr9Q62018 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Gm1401-201ENSMUST00000122048 772 ntBASIC18.54■□□□□ 0.56
Ctr9Q62018 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.54■□□□□ 0.56
Ctr9Q62018 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Gm43514-201ENSMUST00000198852 424 ntBASIC18.54■□□□□ 0.56
Ctr9Q62018 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Gm15590-201ENSMUST00000078419 552 ntBASIC18.54■□□□□ 0.56
Ctr9Q62018 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Ctr9Q62018 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Ctr9Q62018 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ctr9Q62018 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ctr9Q62018 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms