Protein–RNA interactions for Protein: Q61687

Atrx, Transcriptional regulator ATRX, mousemouse

Known RBP Predictions only

Length 2,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtrxQ61687 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AtrxQ61687 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AtrxQ61687 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AtrxQ61687 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
AtrxQ61687 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AtrxQ61687 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
AtrxQ61687 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AtrxQ61687 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AtrxQ61687 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AtrxQ61687 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
AtrxQ61687 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AtrxQ61687 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Mir1247-201ENSMUST00000116706 82 ntBASIC14.23□□□□□ -0.13
AtrxQ61687 Gm13365-201ENSMUST00000121188 973 ntBASIC14.23□□□□□ -0.13
AtrxQ61687 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.23□□□□□ -0.13
AtrxQ61687 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.23□□□□□ -0.13
AtrxQ61687 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.23□□□□□ -0.13
AtrxQ61687 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.23□□□□□ -0.13
AtrxQ61687 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
AtrxQ61687 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
AtrxQ61687 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.23□□□□□ -0.13
AtrxQ61687 Rprl2-201ENSMUST00000157150 290 ntBASIC14.23□□□□□ -0.13
AtrxQ61687 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.23□□□□□ -0.13
AtrxQ61687 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.23□□□□□ -0.13
AtrxQ61687 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AtrxQ61687 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
AtrxQ61687 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.23□□□□□ -0.13
AtrxQ61687 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AtrxQ61687 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Gm15427-201ENSMUST00000117288 531 ntBASIC14.22□□□□□ -0.13
AtrxQ61687 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.22□□□□□ -0.13
AtrxQ61687 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.22□□□□□ -0.13
AtrxQ61687 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.22□□□□□ -0.13
AtrxQ61687 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
AtrxQ61687 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
AtrxQ61687 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.22□□□□□ -0.13
AtrxQ61687 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.22□□□□□ -0.13
AtrxQ61687 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AtrxQ61687 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.22□□□□□ -0.13
AtrxQ61687 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
AtrxQ61687 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.22□□□□□ -0.13
AtrxQ61687 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
AtrxQ61687 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AtrxQ61687 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AtrxQ61687 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AtrxQ61687 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AtrxQ61687 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.21□□□□□ -0.13
AtrxQ61687 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AtrxQ61687 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
AtrxQ61687 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AtrxQ61687 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
AtrxQ61687 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AtrxQ61687 Gm13223-201ENSMUST00000118609 747 ntBASIC14.21□□□□□ -0.13
AtrxQ61687 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AtrxQ61687 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AtrxQ61687 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.21□□□□□ -0.13
AtrxQ61687 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.21□□□□□ -0.13
AtrxQ61687 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AtrxQ61687 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AtrxQ61687 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AtrxQ61687 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AtrxQ61687 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AtrxQ61687 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms