Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Irf9Q61179 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Irf9Q61179 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.6■□□□□ 0.73
Irf9Q61179 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Gm9682-201ENSMUST00000197505 556 ntBASIC19.6■□□□□ 0.73
Irf9Q61179 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.6■□□□□ 0.73
Irf9Q61179 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Irf9Q61179 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Irf9Q61179 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Irf9Q61179 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Irf9Q61179 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.59■□□□□ 0.73
Irf9Q61179 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Irf9Q61179 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Irf9Q61179 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Irf9Q61179 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.59■□□□□ 0.73
Irf9Q61179 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Gm18489-201ENSMUST00000172565 551 ntBASIC19.59■□□□□ 0.73
Irf9Q61179 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.59■□□□□ 0.73
Irf9Q61179 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Irf9Q61179 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Irf9Q61179 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.59■□□□□ 0.73
Irf9Q61179 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Irf9Q61179 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.59■□□□□ 0.73
Irf9Q61179 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Irf9Q61179 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Irf9Q61179 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Irf9Q61179 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Irf9Q61179 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Irf9Q61179 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Gm27300-201ENSMUST00000184085 97 ntBASIC19.58■□□□□ 0.72
Irf9Q61179 Gm27335-201ENSMUST00000184758 97 ntBASIC19.58■□□□□ 0.72
Irf9Q61179 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.58■□□□□ 0.72
Irf9Q61179 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.58■□□□□ 0.72
Irf9Q61179 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.58■□□□□ 0.72
Irf9Q61179 Gm5867-201ENSMUST00000063197 592 ntBASIC19.58■□□□□ 0.72
Irf9Q61179 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Irf9Q61179 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.58■□□□□ 0.72
Irf9Q61179 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Irf9Q61179 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf9Q61179 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf9Q61179 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf9Q61179 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf9Q61179 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Irf9Q61179 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf9Q61179 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Irf9Q61179 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Irf9Q61179 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf9Q61179 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Irf9Q61179 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.57■□□□□ 0.72
Irf9Q61179 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf9Q61179 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf9Q61179 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf9Q61179 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Irf9Q61179 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Irf9Q61179 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms