Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.34□□□□□ -0.27
Scarb1Q61009 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Scarb1Q61009 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scarb1Q61009 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.33□□□□□ -0.27
Scarb1Q61009 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Scarb1Q61009 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scarb1Q61009 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scarb1Q61009 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.33□□□□□ -0.28
Scarb1Q61009 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Scarb1Q61009 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Scarb1Q61009 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.33□□□□□ -0.28
Scarb1Q61009 Gm18115-201ENSMUST00000221209 621 ntBASIC13.33□□□□□ -0.28
Scarb1Q61009 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.33□□□□□ -0.28
Scarb1Q61009 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scarb1Q61009 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Scarb1Q61009 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scarb1Q61009 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.32□□□□□ -0.28
Scarb1Q61009 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.32□□□□□ -0.28
Scarb1Q61009 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.32□□□□□ -0.28
Scarb1Q61009 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Scarb1Q61009 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.32□□□□□ -0.28
Scarb1Q61009 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scarb1Q61009 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Scarb1Q61009 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.31□□□□□ -0.28
Scarb1Q61009 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.31□□□□□ -0.28
Scarb1Q61009 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scarb1Q61009 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.31□□□□□ -0.28
Scarb1Q61009 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.31□□□□□ -0.28
Scarb1Q61009 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scarb1Q61009 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms