Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1h4Q60641 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.06■□□□□ 0
Nr1h4Q60641 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1h4Q60641 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Nr1h4Q60641 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.06■□□□□ 0
Nr1h4Q60641 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Nr1h4Q60641 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Nr1h4Q60641 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Nr1h4Q60641 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1h4Q60641 Gm22240-201ENSMUST00000175225 82 ntBASIC15.05■□□□□ -0
Nr1h4Q60641 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.05■□□□□ -0
Nr1h4Q60641 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1h4Q60641 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1h4Q60641 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Nr1h4Q60641 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1h4Q60641 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Nr1h4Q60641 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1h4Q60641 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1h4Q60641 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1h4Q60641 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Nr1h4Q60641 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nr1h4Q60641 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1h4Q60641 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1h4Q60641 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Nr1h4Q60641 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.05■□□□□ -0
Nr1h4Q60641 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Nr1h4Q60641 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1h4Q60641 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Nr1h4Q60641 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Nr1h4Q60641 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Nr1h4Q60641 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Nr1h4Q60641 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nr1h4Q60641 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nr1h4Q60641 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nr1h4Q60641 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.04■□□□□ -0
Nr1h4Q60641 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nr1h4Q60641 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 Gm29257-201ENSMUST00000186115 639 ntBASIC15.04■□□□□ -0
Nr1h4Q60641 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.04■□□□□ -0
Nr1h4Q60641 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.04■□□□□ -0
Nr1h4Q60641 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.04■□□□□ -0
Nr1h4Q60641 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.04■□□□□ -0
Nr1h4Q60641 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Nr1h4Q60641 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Nr1h4Q60641 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.03■□□□□ -0
Nr1h4Q60641 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.03■□□□□ -0
Nr1h4Q60641 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.03■□□□□ -0
Nr1h4Q60641 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.03■□□□□ -0
Nr1h4Q60641 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.03■□□□□ -0
Nr1h4Q60641 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nr1h4Q60641 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nr1h4Q60641 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nr1h4Q60641 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nr1h4Q60641 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nr1h4Q60641 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nr1h4Q60641 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Nr1h4Q60641 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Nr1h4Q60641 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1h4Q60641 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1h4Q60641 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.02■□□□□ -0
Nr1h4Q60641 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1h4Q60641 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1h4Q60641 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1h4Q60641 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nr1h4Q60641 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms