Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Gm19164-201ENSMUST00000210667 640 ntBASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc85aQ5SP85 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Mir7023-201ENSMUST00000185093 64 ntBASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Gm43474-201ENSMUST00000196415 774 ntBASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Gm45612-201ENSMUST00000211320 160 ntBASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc85aQ5SP85 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Mir6990-201ENSMUST00000183724 91 ntBASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 AC153937.1-201ENSMUST00000218734 412 ntBASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc85aQ5SP85 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Gm37437-201ENSMUST00000194451 1937 ntBASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc85aQ5SP85 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc85aQ5SP85 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms