Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Gm43799-201ENSMUST00000201845 579 ntBASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Gm11539-201ENSMUST00000119837 557 ntBASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Gm13436-201ENSMUST00000120418 567 ntBASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Gm13474-201ENSMUST00000122466 815 ntBASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav8d-1Q5R1H8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Gm13559-201ENSMUST00000120476 863 ntBASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Gm13836-201ENSMUST00000121159 501 ntBASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav8d-1Q5R1H8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav8d-1Q5R1H8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav8d-1Q5R1H8 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.96□□□□□ -0.34
Trav8d-1Q5R1H8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav8d-1Q5R1H8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav8d-1Q5R1H8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav8d-1Q5R1H8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav8d-1Q5R1H8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav8d-1Q5R1H8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav8d-1Q5R1H8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms