Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5d-4Q5R1F6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav5d-4Q5R1F6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav5d-4Q5R1F6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.58□□□□□ -0.23
Trav5d-4Q5R1F6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav5d-4Q5R1F6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav5d-4Q5R1F6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav5d-4Q5R1F6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Trav5d-4Q5R1F6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Mir6404-201ENSMUST00000183699 94 ntBASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5d-4Q5R1F6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms