Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps13aQ5H8C4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Gm11478-201ENSMUST00000117851 599 ntBASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps13aQ5H8C4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Mir1938-201ENSMUST00000158746 100 ntBASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 AY702102-202ENSMUST00000194651 1173 ntBASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps13aQ5H8C4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 Gm24694-201ENSMUST00000180054 110 ntBASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 Gm27663-201ENSMUST00000184839 110 ntBASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps13aQ5H8C4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.51■□□□□ 0.07
Vps13aQ5H8C4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Vps13aQ5H8C4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms