Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim80Q3V061 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trim80Q3V061 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim80Q3V061 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim80Q3V061 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trim80Q3V061 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trim80Q3V061 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim80Q3V061 Ank2-226ENSMUST00000189368 339 ntBASIC16.34■□□□□ 0.21
Trim80Q3V061 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim80Q3V061 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.34■□□□□ 0.21
Trim80Q3V061 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.34■□□□□ 0.21
Trim80Q3V061 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim80Q3V061 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim80Q3V061 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim80Q3V061 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trim80Q3V061 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim80Q3V061 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim80Q3V061 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim80Q3V061 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.33■□□□□ 0.21
Trim80Q3V061 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim80Q3V061 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 Gm17661-201ENSMUST00000170317 270 ntBASIC16.33■□□□□ 0.2
Trim80Q3V061 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim80Q3V061 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim80Q3V061 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Trim80Q3V061 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim80Q3V061 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim80Q3V061 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim80Q3V061 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim80Q3V061 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim80Q3V061 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Trim80Q3V061 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim80Q3V061 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim80Q3V061 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim80Q3V061 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim80Q3V061 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim80Q3V061 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.31■□□□□ 0.2
Trim80Q3V061 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
Trim80Q3V061 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim80Q3V061 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim80Q3V061 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms