Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf223Q3UV31 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf223Q3UV31 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf223Q3UV31 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf223Q3UV31 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Rnf223Q3UV31 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf223Q3UV31 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf223Q3UV31 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf223Q3UV31 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf223Q3UV31 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf223Q3UV31 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf223Q3UV31 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Gm11764-201ENSMUST00000120221 623 ntBASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Gm37153-201ENSMUST00000193637 231 ntBASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf223Q3UV31 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Gm14140-201ENSMUST00000119999 995 ntBASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf223Q3UV31 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.27■□□□□ 0.03
Rnf223Q3UV31 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf223Q3UV31 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rnf223Q3UV31 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf223Q3UV31 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Gm45167-201ENSMUST00000208007 322 ntBASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf223Q3UV31 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms