Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Naf1Q3UMQ8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Gm7222-201ENSMUST00000117512 906 ntBASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Gm5682-201ENSMUST00000173402 505 ntBASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Gm27628-201ENSMUST00000184911 107 ntBASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Naf1Q3UMQ8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Naf1Q3UMQ8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Naf1Q3UMQ8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Naf1Q3UMQ8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Naf1Q3UMQ8 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.02■□□□□ 0.15
Naf1Q3UMQ8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Naf1Q3UMQ8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Naf1Q3UMQ8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Psmb5-202ENSMUST00000227257 622 ntBASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Naf1Q3UMQ8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16■□□□□ 0.15
Naf1Q3UMQ8 AC154222.1-201ENSMUST00000223882 475 ntBASIC16■□□□□ 0.15
Naf1Q3UMQ8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Naf1Q3UMQ8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms