Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43aQ3TL54 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Gm16061-201ENSMUST00000122167 857 ntBASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Gm7213-201ENSMUST00000215977 950 ntBASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43aQ3TL54 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43aQ3TL54 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trim43aQ3TL54 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim43aQ3TL54 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trim43aQ3TL54 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim43aQ3TL54 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim43aQ3TL54 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim43aQ3TL54 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim43aQ3TL54 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim43aQ3TL54 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43aQ3TL54 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms