Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ptchd3Q0EEE2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Gm13186-201ENSMUST00000118031 316 ntBASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ptchd3Q0EEE2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ptchd3Q0EEE2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ptchd3Q0EEE2 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.27■□□□□ 0.03
Ptchd3Q0EEE2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ptchd3Q0EEE2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ptchd3Q0EEE2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ptchd3Q0EEE2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ptchd3Q0EEE2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ptchd3Q0EEE2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptchd3Q0EEE2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Gm9987-201ENSMUST00000069768 567 ntBASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptchd3Q0EEE2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms