Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.16□□□□□ -0.3
Tff1Q08423 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Tff1Q08423 Gm29518-201ENSMUST00000190858 372 ntBASIC13.16□□□□□ -0.3
Tff1Q08423 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.16□□□□□ -0.3
Tff1Q08423 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Tff1Q08423 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Tff1Q08423 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Tff1Q08423 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Tff1Q08423 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Tff1Q08423 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.15□□□□□ -0.3
Tff1Q08423 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.15□□□□□ -0.3
Tff1Q08423 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.15□□□□□ -0.3
Tff1Q08423 Gm17808-201ENSMUST00000200859 894 ntBASIC13.15□□□□□ -0.3
Tff1Q08423 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.15□□□□□ -0.3
Tff1Q08423 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Tff1Q08423 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.15□□□□□ -0.3
Tff1Q08423 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tff1Q08423 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Tff1Q08423 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Tff1Q08423 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tff1Q08423 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.14□□□□□ -0.31
Tff1Q08423 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.14□□□□□ -0.31
Tff1Q08423 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.14□□□□□ -0.31
Tff1Q08423 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.14□□□□□ -0.31
Tff1Q08423 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Tff1Q08423 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.14□□□□□ -0.31
Tff1Q08423 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tff1Q08423 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.13□□□□□ -0.31
Tff1Q08423 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.13□□□□□ -0.31
Tff1Q08423 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.13□□□□□ -0.31
Tff1Q08423 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.13□□□□□ -0.31
Tff1Q08423 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tff1Q08423 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms