Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.21□□□□□ -0.45
Cdx4Q07424 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.21□□□□□ -0.45
Cdx4Q07424 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
Cdx4Q07424 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx4Q07424 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx4Q07424 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cdx4Q07424 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx4Q07424 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx4Q07424 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx4Q07424 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx4Q07424 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.21□□□□□ -0.46
Cdx4Q07424 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Cdx4Q07424 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx4Q07424 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cdx4Q07424 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdx4Q07424 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.19□□□□□ -0.46
Cdx4Q07424 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Cdx4Q07424 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx4Q07424 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdx4Q07424 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdx4Q07424 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdx4Q07424 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Cdx4Q07424 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdx4Q07424 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms